morer complete documentation

README.md

@@ -26,14 +26,17 @@ the server and pulls the data to the client computer.
 
   - *README.md*         this documentation 
   - *mchpa.py*          client program 
-  - *rePoscidaq.py*     a simple oscilloscope and daq client using the mcpha server 
-  - *rpControl.ui*      qt5 tab for *redPosci* application   
-  - *mcpha_daq.ui*      qt5 tab for oscilloscope with daq mode
+  - *redPoscidaq.py*    a simple oscilloscope and daq client using the mcpha server
+  - *examples/*         recorded spectra
+  - *examples/peakFitter.py* code to find and fit peaks in spectum data
+  - *read_npy.py*       a simple example to read waveforms saved in *.npy* format
   - *redP_mimocorb.py*  runs *redPoscdaq* as a client of the buffer manager *mimoCoRB*
-  - *setup.yaml*        coniguration script defining the *mimoCoRB* application
   - *run_daq.py*        script to strat the *mimoCoRB* application
+  - *setup.yaml*        coniguration script defining the *mimoCoRB* application
   - *modules/* and *config/* contain code and configuration files for the *redP_mimoCoRB* application
   - *mcpha.ui*          qt5 graphical user interface for *mcpha* application 
+  - *rpControl.ui*      qt5 tab for *redPosci* application   
+  - *mcpha_daq.ui*      qt5 tab for oscilloscope with daq mode
   - *mcpha_gen.ui*      qt5 tab for generator 
   - *mcpha_osc.ui*      qt5 tab for oscilloscope
   - *mcpha_hst.ui*      qt5 tab for histogram display 
@@ -194,20 +197,21 @@ Note that presently mcpha.py exports data in human-readable format using
     frequency and the rise and fall times specified in the graphical interface. The signals are 
     available at the *out1*  connector of the RedPitaya board.   
  >    
- >   Pulses can be generated at a fixed frequency, or with random timing corresponding to a 
+ >  Pulses can be generated at a fixed frequency, or with random timing corresponding to a 
     Poisson process with a mean pulse rate given by the chosen frequency. The latter option is 
     useful to study "pile-up" effects from overlapping pulses. 
 
->  *read_hst.py*  illustrates how to read and plot spectrum data exported by mcpha.py.
+ >  *read_hst.py*  illustrates how to read and plot spectrum data exported by mcpha.py.
 
->  *read_osc.py* demonstrates how to read and plot waveform data exported from the 
-   oscilloscope tab of mcpha.py.
+ >  *read_osc.py* demonstrates how to read and plot waveform data exported from the 
+    oscilloscope tab of mcpha.py.
 
 ## Examples
 
 The directory *examples/* contains some spectra recorded with *mchph.py* and the Python
 program *peakFitter.py* to find and precisely fit peaks in recorded spectra. An example is
 shown here:
+
 ![Spectrum with fitted peaks](images/Spectrum.png){width=800px}