diff --git a/mpp b/mpp index ee33eb4836a746c7a74b83248660aad95a1f4e16..9979806b3f3f94fa6d5f44c3fd7ebb5cbb3382fa 160000 --- a/mpp +++ b/mpp @@ -1 +1 @@ -Subproject commit ee33eb4836a746c7a74b83248660aad95a1f4e16 +Subproject commit 9979806b3f3f94fa6d5f44c3fd7ebb5cbb3382fa diff --git a/src/cellmodels/solvers/MElphySolver.cpp b/src/cellmodels/solvers/MElphySolver.cpp index 131433395f86ac4b0aa1c53c1cf08c034afb2b6b..c0f30225e48ecdcddd63e77854915bd4e303ff36 100644 --- a/src/cellmodels/solvers/MElphySolver.cpp +++ b/src/cellmodels/solvers/MElphySolver.cpp @@ -33,7 +33,7 @@ void MElphySolver::Solve(TimeSeries µTS, Vectors &u) { g[i] = std::vector<double>(cellModel.Size());//vorher: size for (row r = u[0].rows(); r != u[0].rows_end(); ++r) { - for (int j = 0; j < r.n(); ++j) { + for (int j = 0; j < r.NumberOfDofs(); ++j) { for (int i = 0; i < cellModel.Size(); ++i) {//stimmt hier der max-WErt? vw[i] = (*gating)[i](r, j); } @@ -145,7 +145,7 @@ void MElphySolver::PrintMaxMinGating() const { minGatingOverVertices[i] = 10000000; } for (row r = (*maxgating).rows(); r != (*maxgating).rows_end(); ++r) { - for (int j = 0; j < r.n(); ++j) { + for (int j = 0; j < r.NumberOfDofs(); ++j) { for (int i = 0; i < cellModel.Size(); i++) { if ((*mingating)[i](r, j) < minGatingOverVertices[i]) { minGatingOverVertices[i] = (*mingating)[i](r, j); diff --git a/src/coupled/solvers/CellModelSolver.cpp b/src/coupled/solvers/CellModelSolver.cpp index e2af47122369fce012977219e084e03480fe8cfb..247670d617ee13f59a8a7f98dc6c3c8a08c28501 100644 --- a/src/coupled/solvers/CellModelSolver.cpp +++ b/src/coupled/solvers/CellModelSolver.cpp @@ -31,7 +31,7 @@ void CellModelSolver::Solve(Vector &potential, Vector &stretch) { // Update Invariant for (row r = stretch.rows(); r != stretch.rows_end(); ++r) { - for (int j = 0; j < r.n(); ++j) { + for (int j = 0; j < r.NumberOfDofs(); ++j) { uNew[2](r, j) = (1.0 + uNew[1](r, j)) * (1.0 + uNew[1](r, j)); } } diff --git a/src/electrophysiology/assemble/IElphyAssemble.cpp b/src/electrophysiology/assemble/IElphyAssemble.cpp index e49e36a2affa8b38edb70610c43dee5ff2ea8758..8cbd040261922cfc89ae34b70d3fb7cfc1598d28 100644 --- a/src/electrophysiology/assemble/IElphyAssemble.cpp +++ b/src/electrophysiology/assemble/IElphyAssemble.cpp @@ -80,7 +80,7 @@ void IElphyAssemble::PrintVariable(const Vector &var,const std::string &varname) Point P = problem.getEvaluationPointAt(i); if (var.find_row(P) != var.rows_end()) { row r = var.find_row(P); - if (r.n() == 2) { + if (r.NumberOfDofs() == 2) { value = var(P, 1); } else { value = var(P, 0); @@ -154,7 +154,7 @@ void IElphyAssemble::PrintV(const Vector &V) const { Point P = problem.getEvaluationPointAt(i); if (V.find_row(P) != V.rows_end()) { row r = V.find_row(P); - if (r.n() == 2) { + if (r.NumberOfDofs() == 2) { v = V(P, 1); } else { v = V(P, 0); diff --git a/src/electrophysiology/assemble/MonodomainSplitting.cpp b/src/electrophysiology/assemble/MonodomainSplitting.cpp index 3102edd0e389f9a8a81190755edb744fc6c6465c..4b641905b1a50bb80f4ad60789bc7995b1a0b6e1 100644 --- a/src/electrophysiology/assemble/MonodomainSplitting.cpp +++ b/src/electrophysiology/assemble/MonodomainSplitting.cpp @@ -29,7 +29,7 @@ void MonodomainSplitting::updateExternalCurrent(const Vector &V) { if(!isNormIextZero) { double tNew = Time()+timeUpdateIext; for (row r = Iext->rows(); r != Iext->rows_end(); ++r) { - for (int j = 0; j < r.n(); ++j) { + for (int j = 0; j < r.NumberOfDofs(); ++j) { (*Iext)(r, j) = (1 - theta) * excitationFunc(1000 * Time(), Amplitude(excData, r, j), 1000 * Excitation(excData, r, j), 1000 * Duration(excData, r, j)); diff --git a/src/electrophysiology/solvers/SplittingSolver.cpp b/src/electrophysiology/solvers/SplittingSolver.cpp index d99d101b26ac796033bcec84cb9178dac34ae841..39e6fb6e4437ce3517f4d4c4752911bd7b1e3026 100644 --- a/src/electrophysiology/solvers/SplittingSolver.cpp +++ b/src/electrophysiology/solvers/SplittingSolver.cpp @@ -40,7 +40,7 @@ void IBTSplittingSolver::Initialize(IElphyAssemble &A, Vector &V) { atriaParameters.initParameters(A.StepSize() / (odeSteps * subSteps)); for (row r = V.rows(); r != V.rows_end(); ++r) { - for (int j = 0; j < r.n(); ++j) { + for (int j = 0; j < r.NumberOfDofs(); ++j) { if (DP(r, j) == 1) { cellModel[r() + j * shift2] = std::make_unique<ElphyIBT>(atriaParameters, Excitation(A.ExcitationData(), r, j), @@ -58,7 +58,7 @@ void IBTSplittingSolver::Initialize(IElphyAssemble &A, Vector &V) { } } else { for (row r = V.rows(); r != V.rows_end(); ++r) { - for (int j = 0; j < r.n(); ++j) { + for (int j = 0; j < r.NumberOfDofs(); ++j) { cellModel[r() + j * shift2] = std::make_unique<ElphyIBT>(ventricleParameters, Excitation(A.ExcitationData(), r, j), Duration(A.ExcitationData(), r, j), @@ -75,7 +75,7 @@ void IBTSplittingSolver::solveCellModels(Vectors &values, double t, double dt) { double e_dt = dt / subSteps; for (row r = V.rows(); r != V.rows_end(); ++r) { - for (int j = 0; j < r.n(); j++) { + for (int j = 0; j < r.NumberOfDofs(); j++) { for (int k = 0; k < subSteps; ++k) { V(r, j) = cellModel.find(r() + j * shift2)->second->update(e_dt, V(r, j)); }